STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV10521.1PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: avi:Avi_7362 xylose isomerase. (329 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; KEGG: mlo:mlr5033 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
    
 0.905
xylA
TIGRFAM: xylose isomerase; KEGG: mlo:mlr5036 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family.
     
 0.905
ADV11583.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: sno:Snov_3728 carbohydrate kinase, FGGY-like protein.
    
 0.905
ADV09516.1
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sme:SMc01214 putative zinc-containing alcohol dehydrogenase protein.
     
  0.900
ADV09722.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mlo:mll4920 mannitol dehydrogenase.
     
  0.900
ADV13634.1
PFAM: protein of unknown function DUF1498; KEGG: mlo:mlr8329 hypothetical protein.
     
  0.900
ADV14054.1
PFAM: PfkB domain protein; KEGG: mlo:mll7580 fructokinase.
    
  0.900
ADV14318.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll7191 putative oxidoreductase.
     
  0.900
ADV10520.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: avi:Avi_7364 ABC transporter substrate binding protein.
     0.858
ADV10517.1
PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: avi:Avi_7367 DNA-binding transcriptional repressor RpiR.
     0.843
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.