STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV12988.1PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: mlo:mll0509 hypothetical protein. (312 aa)    
Predicted Functional Partners:
ADV12987.1
PFAM: protein of unknown function DUF1326; KEGG: mlo:mll0508 hypothetical protein.
 
     0.942
ADV10043.1
PFAM: protein of unknown function DUF1326; KEGG: mlo:mll4476 hypothetical protein.
 
     0.782
ADV13768.1
PFAM: protein of unknown function DUF1326; KEGG: mlo:mlr8146 hypothetical protein.
 
     0.780
ADV12986.1
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.761
ADV12989.1
KEGG: mlo:mlr0511 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding.
 
     0.617
ADV12985.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mll0505 quinone oxidoreductase.
       0.591
ADV11465.1
PFAM: GYD family protein; KEGG: mlo:mll2465 hypothetical protein.
  
     0.470
ADV14016.1
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: mlo:mll7634 2-haloacid halidohydrolase IVA; PFAM: Haloacid dehalogenase domain protein hydrolase.
  
     0.424
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.