STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV14692.1PFAM: type IV secretory pathway VirB3 family protein; KEGG: virB3; T-DNA transfer exported protein (virB3). (108 aa)    
Predicted Functional Partners:
ADV14691.1
KEGG: smd:Smed_6159 type IV secretion system protein VirB4; TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region.
  
 
 0.976
ADV14687.1
Type IV secretory pathway component VirB8 protein; KEGG: virB8; probable virB8 gene.
  
 
 0.971
ADV14689.1
PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: smd:Smed_6157 type IV secretion system protein VirB6.
  
  
 0.947
ADV14616.1
KEGG: mlo:mlr6400 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase.
  
 
 0.898
ADV14685.1
PFAM: conjugation TrbI family protein; KEGG: smd:Smed_6153 type IV secretion system protein VirB10.
  
  
 0.888
ADV14686.1
KEGG: smd:Smed_6154 type IV secretion system protein VirB9; TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX.
  
  
 0.888
ADV14684.1
P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
  
 0.876
ADV14693.1
PFAM: Conjugal transfer protein TrbC; KEGG: smd:Smed_6161 type IV secretion system pilin subunit VirB2.
     
 0.840
ADV14694.1
PFAM: Lytic transglycosylase catalytic; KEGG: smd:Smed_6162 type IV secretion system lytic transglycosylase VirB1.
     
 0.817
ADV14690.1
KEGG: smd:Smed_6158 type IV secretion system protein VirB5.
       0.771
Your Current Organism:
Mesorhizobium ciceri biovar
NCBI taxonomy Id: 765698
Other names: M. ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae WSM1271, Mesorhizobium ciceri biovar biserrulae str. WSM1271, Mesorhizobium ciceri biovar biserrulae strain WSM1271, Mesorhizobium ciceri bv. biserrulae WSM1271
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