STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72926.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
AFL72927.1
TIGRFAM: methyltransferase, FkbM family.
      0.877
AFL72922.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: C-methyltransferase; Hypothetical methyltransferase.
       0.773
AFL72923.1
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase.
       0.773
AFL72924.1
CDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase.
       0.773
AFL72925.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase.
       0.773
AFL72919.1
PFAM: Cephalosporin hydroxylase.
       0.612
AFL72920.1
Hypothetical protein.
       0.612
AFL72921.1
PFAM: NAD dependent epimerase/dehydratase family.
       0.612
AFL72918.1
Putative O-linked N-acetylglucosamine transferase, SPINDLY family; PFAM: Tetratricopeptide repeat.
      0.463
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.