STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73224.1PFAM: PhoH-like protein. (472 aa)    
Predicted Functional Partners:
AFL73223.1
Peroxiredoxin; PFAM: AhpC/TSA family.
 
     0.647
AFL72300.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
  
 0.572
AFL72301.1
PFAM: Protein of unknown function (DUF444); Belongs to the UPF0229 family.
   
    0.534
AFL73222.1
Glycine cleavage system regulatory protein; PFAM: ACT domain.
       0.509
AFL72302.1
PFAM: SpoVR like protein.
   
    0.495
AFL75921.1
RNAse G; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
    0.479
AFL73800.1
Putative membrane protein; PFAM: EamA-like transporter family.
   
    0.438
rne
RNAse E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
  
    0.422
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.