STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL73315.1PFAM: Transposase IS116/IS110/IS902 family; Transposase. (307 aa)    
Predicted Functional Partners:
AFL73316.1
PFAM: Transposase.
     
 0.696
AFL73317.1
PFAM: Transposase IS116/IS110/IS902 family; Transposase.
 
    
0.650
AFL74838.1
PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.565
AFL73438.1
PFAM: Uncharacterized conserved protein (DUF2183).
  
     0.484
AFL74496.1
Hypothetical protein.
  
     0.449
AFL76264.1
PFAM: Class III cytochrome C family.
  
     0.410
AFL74835.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.