STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA90808.1Membrane-bound metallopeptidase; PFAM: Uncharacterized protein conserved in bacteria (DUF2325). (454 aa)    
Predicted Functional Partners:
AGA90807.1
Hypothetical protein.
       0.658
AGA91388.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
  
  
 0.636
AGA90008.1
Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein.
  
     0.609
AGA91595.1
Hypothetical protein.
  
     0.526
AGA90805.1
Bacterioferritin-associated ferredoxin; PFAM: BFD-like [2Fe-2S] binding domain.
       0.447
AGA90806.1
Hypothetical protein.
       0.447
Your Current Organism:
Thioflavicoccus mobilis
NCBI taxonomy Id: 765912
Other names: T. mobilis 8321, Thioflavicoccus mobilis 8321, Thioflavicoccus mobilis ATCC 700959, Thioflavicoccus mobilis str. 8321, Thioflavicoccus mobilis strain 8321
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.