STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV32858.1PFAM: MotA/TolQ/ExbB proton channel; KEGG: alv:Alvin_1015 MotA/TolQ/ExbB proton channel. (221 aa)    
Predicted Functional Partners:
EGV32857.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: alv:Alvin_1016 biopolymer transport protein ExbD/TolR.
 
 
 0.996
EGV31223.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: alv:Alvin_0199 TonB family protein.
 
 
 0.974
EGV30609.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: alv:Alvin_2250 biopolymer transport protein ExbD/TolR; overlaps another CDS with the same product name.
 
 
 0.948
EGV32818.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: alv:Alvin_0877 biopolymer transport protein ExbD/TolR.
 
 
 0.943
tolR
Biopolymer transport protein ExbD/TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.931
EGV30610.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: alv:Alvin_2251 biopolymer transport protein ExbD/TolR; overlaps another CDS with the same product name.
 
 
 0.927
EGV29694.1
TonB family protein; TIGRFAM: TonB, C-terminal; KEGG: alv:Alvin_0347 TonB family protein.
 
 
 0.914
EGV32817.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.909
EGV29693.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hch:HCH_06976 biopolymer transport protein.
  
 
 0.908
EGV28257.1
Protein TolA; KEGG: alv:Alvin_0954 protein TolA.
  
 
 0.891
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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