STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGV31419.1TIGRFAM: Cysteine desulfurase, SufS; KEGG: alv:Alvin_1507 cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase; Fe-S metabolism associated SufE; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (593 aa)    
Predicted Functional Partners:
EGV31377.1
TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: alv:Alvin_0740 FeS assembly ATPase SufC; SMART: ATPase, AAA+ type, core.
 
 0.999
EGV31378.1
KEGG: alv:Alvin_0739 FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; PFAM: SUF system FeS cluster assembly, SufBD.
 
 0.999
EGV31376.1
KEGG: alv:Alvin_0741 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD.
 
 0.998
EGV33876.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 0.996
EGV28329.1
NifQ family protein; PFAM: NifQ; KEGG: alv:Alvin_3043 NifQ family protein.
  
 0.992
EGV31375.1
KEGG: alv:Alvin_0742 FeS assembly SUF system protein; TIGRFAM: SUF system FeS cluster assembly associated; PFAM: Protein of unknown function DUF59.
  
 0.980
EGV28733.1
PFAM: Fe-S metabolism associated SufE; KEGG: alv:Alvin_2668 Fe-S metabolism associated SufE.
 
0.979
EGV28683.1
Cysteine desulfurase; KEGG: alv:Alvin_1624 aminotransferase class V protein; PFAM: Aminotransferase, class V/Cysteine desulfurase.
 
0.961
EGV27899.1
Hypothetical protein; KEGG: pif:PITG_05446 pyridoxal-dependent decarboxylase, putative.
  
 0.957
EGV33958.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: alv:Alvin_2892 endonuclease/exonuclease/phosphatase.
   
   0.912
Your Current Organism:
Thiorhodococcus drewsii
NCBI taxonomy Id: 765913
Other names: T. drewsii AZ1, Thiorhodococcus drewsii AZ1, Thiorhodococcus drewsii DSM 15006, Thiorhodococcus drewsii str. AZ1, Thiorhodococcus drewsii strain AZ1
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