STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGZ45410.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: alv:Alvin_2795 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (321 aa)    
Predicted Functional Partners:
EGZ45411.1
PFAM: Inositol monophosphatase; KEGG: tgr:Tgr7_2063 inositol-phosphate phosphatase.
  
  
 0.699
EGZ45788.1
KEGG: alv:Alvin_0033 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
  
  
 0.667
EGZ44815.1
Pyruvate dehydrogenase (NADP(+))., Pyruvate synthase; KEGG: hha:Hhal_0066 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
 
 
 
 0.629
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.595
EGZ47579.1
PFAM: Amino acid-binding ACT; KEGG: tgr:Tgr7_0826 amino acid-binding ACT domain protein.
  
 
 0.565
EGZ44679.1
TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit; KEGG: tgr:Tgr7_1513 hypothetical protein.
  
     0.530
EGZ45408.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hch:HCH_02657 transcriptional regulator CysB; Belongs to the LysR transcriptional regulatory family.
 
    
0.529
EGZ42749.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold-4; Extracellular solute-binding protein, family 3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: alv:Alvin_1490 multi-sensor hybrid histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; Extracellular solute-bindi [...]
     
 0.506
EGZ46884.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; NMT1/THI5-like; Extracellular solute-binding protein, family 3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; KEGG: hmo:HM1_1611 sensor histidine kinase, putative; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Extracellular solute-binding protein, family 3; PAS; PAC motif; Signal transduction response regulator [...]
     
 0.496
EGZ49402.1
TIGRFAM: Conserved hypothetical protein CHP02449; KEGG: tgr:Tgr7_2767 hypothetical protein.
  
     0.459
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.