STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09907Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives. (86 aa)    
Predicted Functional Partners:
C357_01405
Hypothetical protein.
  
     0.775
C357_18197
Hypothetical protein.
  
     0.775
C357_22350
Transposase ISRme5 (copy d); COG2826 Transposase and inactivated derivatives, IS30 family.
  
     0.775
C357_12759
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.466
C357_21342
Transposase of ISMdi8, IS481 family protein; COG2801 Transposase and inactivated derivatives.
 
     0.424
C357_08151
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
     0.413
C357_10784
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.403
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.