STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsQCOG0186 Ribosomal protein S17. (108 aa)    
Predicted Functional Partners:
rpsF
COG0360 Ribosomal protein S6.
   
 0.999
rpsR
COG0238 Ribosomal protein S18.
   
 0.999
rpsB
COG0052 Ribosomal protein S2.
 
 0.999
rpsJ
COG0051 Ribosomal protein S10.
  
 0.999
rplD
COG0088 Ribosomal protein L4.
 
 0.999
rplB
COG0090 Ribosomal protein L2.
 
 0.999
rpsS
COG0185 Ribosomal protein S19.
 
 0.999
rplV
COG0091 Ribosomal protein L22.
 
 
 0.999
rpsC
COG0092 Ribosomal protein S3.
 
 0.999
rplP
COG0197 Ribosomal protein L16/L10E.
 
 0.999
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.