STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_10944COG1414 Transcriptional regulator. (267 aa)    
Predicted Functional Partners:
C357_10904
Thiolase; Overlaps another CDS with the same product name.
 
 
  0.777
C357_10849
COG1414 Transcriptional regulator.
  
     0.774
C357_10874
COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
 
  
 0.731
C357_10859
COG1960 Acyl-CoA dehydrogenases; overlaps another CDS with the same product name.
  
  
  0.723
C357_10864
MmgE/PrpD family protein; COG2079 Uncharacterized protein involved in propionate catabolism.
  
    0.711
C357_10869
Hypothetical protein.
  
     0.710
C357_10879
Coenzyme A transferase; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
   
 0.709
C357_09782
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.691
C357_10844
Dehydratase; COG2030 Acyl dehydratase.
  
  
  0.687
C357_10794
Hypothetical protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.684
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.