STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAP-25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (212 aa)    
Predicted Functional Partners:
VAMP
V-SNARE coiled-coil homology domain-containing protein.
   
 0.992
W4Y9B6_STRPU
t-SNARE coiled-coil homology domain-containing protein.
   
 0.988
W4YU06_STRPU
Uncharacterized protein.
   
 
 0.964
sec1/munc18
Syntaxin binding protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.951
W4XR13_STRPU
C2 domain-containing protein.
   
 0.896
W4Y237_STRPU
Nucleos_tra2_C domain-containing protein.
   
 0.896
W4XMR8_STRPU
Uncharacterized protein.
   
 0.873
W4ZGP1_STRPU
Uncharacterized protein.
   
 0.873
W4ZKU5_STRPU
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.866
W4YAY9_STRPU
Uncharacterized protein.
   
 
 0.807
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.