STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XA94_STRPUUncharacterized protein. (293 aa)    
Predicted Functional Partners:
W4Z0Y4_STRPU
Uncharacterized protein.
 
     0.945
W4Y2T7_STRPU
Uncharacterized protein.
 
     0.798
W4ZA75_STRPU
Uncharacterized protein.
 
     0.791
W4XSY8_STRPU
Uncharacterized protein.
     
 0.583
W4YW35_STRPU
RabBD domain-containing protein.
     
 0.583
W4Z8Z7_STRPU
RabBD domain-containing protein.
     
 0.583
W4XIV5_STRPU
Uncharacterized protein.
  
     0.536
W4ZIJ9_STRPU
Uncharacterized protein.
  
     0.457
VAMP
V-SNARE coiled-coil homology domain-containing protein.
   
 0.446
W4XPB9_STRPU
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.401
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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