STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XC95_STRPUAAA domain-containing protein; Belongs to the AAA ATPase family. (531 aa)    
Predicted Functional Partners:
W4YS12_STRPU
PCI domain-containing protein.
   
 0.759
W4XIU9_STRPU
VWFA domain-containing protein.
   
 0.741
W4XCZ2_STRPU
PCI domain-containing protein.
   
 0.731
W4ZKD8_STRPU
PCI domain-containing protein.
   
 0.729
KATNB1
Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
   
 
 0.724
W4XDA5_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.724
W4YF59_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.724
W4ZL39_STRPU
PCI domain-containing protein.
   
 0.722
W4XBL1_STRPU
Uncharacterized protein.
   
 0.720
W4ZIB8_STRPU
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.690
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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