STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XGX6_STRPUUncharacterized protein. (399 aa)    
Predicted Functional Partners:
W4YJ66_STRPU
BcrAD_BadFG domain-containing protein.
     
 0.906
W4XXM6_STRPU
Uncharacterized protein.
   
 
 0.904
W4XPA5_STRPU
Epimerase_2 domain-containing protein.
     
 0.902
VAMP
V-SNARE coiled-coil homology domain-containing protein.
   
 0.838
W4YAT6_STRPU
Uncharacterized protein.
   
 
 0.641
W4XZI3_STRPU
Uncharacterized protein.
   
 
 0.618
W4XZI4_STRPU
Synapsin_C domain-containing protein.
   
 
 0.618
W4ZCM1_STRPU
Uncharacterized protein.
   
 
 0.610
W4XLX8_STRPU
Uncharacterized protein.
      
 0.567
W4XU10_STRPU
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.567
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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