STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XMH7_STRPUUncharacterized protein. (262 aa)    
Predicted Functional Partners:
W4Y4F7_STRPU
MI domain-containing protein.
   
   0.930
W4Z8L1_STRPU
WD_REPEATS_REGION domain-containing protein.
    
   0.701
W4YUT2_STRPU
Sm domain-containing protein.
    
 
 0.640
W4YA42_STRPU
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 
 0.635
W4XD55_STRPU
Uncharacterized protein.
   
   0.564
W4XMT4_STRPU
Uncharacterized protein.
   
 
 0.555
W4Z0Z0_STRPU
Cir_N domain-containing protein.
   
 
 0.554
W4XK17_STRPU
Uncharacterized protein.
    
   0.551
W4XK18_STRPU
WD_REPEATS_REGION domain-containing protein.
    
   0.551
W4XIH2_STRPU
SKIP_SNW domain-containing protein.
   
 
 0.531
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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