STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XWG2_STRPUHist_deacetyl domain-containing protein. (490 aa)    
Predicted Functional Partners:
W4Y269_STRPU
ARID domain-containing protein.
    
 0.919
W4YZA2_STRPU
Tudor domain-containing protein.
    
 0.919
W4YI24_STRPU
HDAC_interact domain-containing protein.
   
 0.820
W4XJD3_STRPU
Uncharacterized protein.
    
 0.749
W4Z652_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.664
W4ZDM4_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.664
W4ZK18_STRPU
Uncharacterized protein.
   
 0.662
W4XKM5_STRPU
Uncharacterized protein.
    
 0.647
W4ZCX0_STRPU
Uncharacterized protein.
    
 0.647
W4XLT3_STRPU
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 
 0.638
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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