STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Y4D5_STRPUUncharacterized protein. (122 aa)    
Predicted Functional Partners:
W4YG48_STRPU
Uncharacterized protein.
   
 0.989
W4ZEA7_STRPU
POP4 domain-containing protein.
   
 0.987
W4XP95_STRPU
Uncharacterized protein.
  
 0.986
W4XBE1_STRPU
Uncharacterized protein.
   
 0.983
W4YQR6_STRPU
Ribosomal_L7Ae domain-containing protein.
   
 0.966
W4YY23_STRPU
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.851
W4YMQ8_STRPU
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.838
W4XC11_STRPU
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.826
W4Z8J5_STRPU
Alba domain-containing protein.
    
 0.825
W4Y5S7_STRPU
Ribosomal_L7Ae domain-containing protein.
   
 0.780
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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