STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Y7Y4_STRPUIntegrase catalytic domain-containing protein. (207 aa)    
Predicted Functional Partners:
W4ZGF5_STRPU
DUF5641 domain-containing protein.
  
     0.502
W4YWQ4_STRPU
Uncharacterized protein.
  
     0.486
W4XD83_STRPU
DUF1758 domain-containing protein.
  
     0.484
W4XI07_STRPU
Uncharacterized protein.
  
     0.464
W4XNR9_STRPU
Uncharacterized protein.
 
     0.460
W4XIU7_STRPU
CCHC-type domain-containing protein.
  
     0.456
W4ZHZ4_STRPU
Uncharacterized protein.
 
     0.455
W4XRP6_STRPU
DUF5641 domain-containing protein.
  
     0.444
W4YKE0_STRPU
Uncharacterized protein.
  
     0.442
W4YST2_STRPU
DUF5641 domain-containing protein.
  
     0.419
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.