STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YC01_STRPUZmiz1_N domain-containing protein. (78 aa)    
Predicted Functional Partners:
W4YSP6_STRPU
Small ubiquitin-related modifier.
    
 0.925
W4XNX5_STRPU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.924
W4XD07_STRPU
Uncharacterized protein.
    
 0.666
W4XM95_STRPU
Uncharacterized protein.
    
 0.666
W4XR66_STRPU
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.666
W4XLC6_STRPU
Uncharacterized protein.
   
 0.599
W4YH67_STRPU
Signal transducer and activator of transcription.
   
 0.599
W4YJS3_STRPU
Uncharacterized protein.
   
 0.599
W4ZKT2_STRPU
Uncharacterized protein.
   
 0.599
W4Y4S3_STRPU
Uncharacterized protein.
    
 
 0.598
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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