STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YLC4_STRPUUncharacterized protein. (324 aa)    
Predicted Functional Partners:
W4XLY6_STRPU
Uncharacterized protein.
   
 0.984
W4YA42_STRPU
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.969
W4YUT2_STRPU
Sm domain-containing protein.
   
 0.969
W4Z7B1_STRPU
Small nuclear ribonucleoprotein Sm D3.
   
 0.959
H3IWJ8_STRPU
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.954
W4XB80_STRPU
Small nuclear ribonucleoprotein G.
   
 0.952
W4YLM9_STRPU
Uncharacterized protein.
   
 0.951
W4YLX1_STRPU
Nop domain-containing protein.
   
 0.951
W4YF29_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.949
W4YVC0_STRPU
Uncharacterized protein.
   
 0.949
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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