W4YT35_STRPU protein (Strongylocentrotus purpuratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W4YT35_STRPU

Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (378 aa)

Predicted Functional Partners:

W4Y086_STRPU

0.880

W4Y8T7_STRPU

0.860

Cyp51

0.860

W4Y6T1_STRPU

0.854

W4XDE9_STRPU

0.851

W4XXB3_STRPU

0.846

W4XUK9_STRPU

0.733

W4ZGU8_STRPU

0.721

W4ZGU9_STRPU

0.721

W4Z6J8_STRPU

0.683

Your Current Organism:

Strongylocentrotus purpuratus

NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cyp51	W4XDE9_STRPU	W4ZBR3	W4XDE9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.987
Cyp51	W4XUK9_STRPU	W4ZBR3	W4XUK9	Uncharacterized protein; Belongs to the cytochrome P450 family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.971
Cyp51	W4XXB3_STRPU	W4ZBR3	W4XXB3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.986
Cyp51	W4Y086_STRPU	W4ZBR3	W4Y086	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.983
Cyp51	W4Y6T1_STRPU	W4ZBR3	W4Y6T1	Uncharacterized protein; Belongs to the cytochrome P450 family.	SQHop_cyclase_C domain-containing protein.	0.995
Cyp51	W4YT35_STRPU	W4ZBR3	W4YT35	Uncharacterized protein; Belongs to the cytochrome P450 family.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.860
Cyp51	W4Z6J8_STRPU	W4ZBR3	W4Z6J8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Nudix hydrolase domain-containing protein.	0.921
Cyp51	W4ZGU8_STRPU	W4ZBR3	W4ZGU8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.900
Cyp51	W4ZGU9_STRPU	W4ZBR3	W4ZGU9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.900
W4XDE9_STRPU	Cyp51	W4XDE9	W4ZBR3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.987
W4XDE9_STRPU	W4XUK9_STRPU	W4XDE9	W4XUK9	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.780
W4XDE9_STRPU	W4XXB3_STRPU	W4XDE9	W4XXB3	Uncharacterized protein.	Uncharacterized protein.	0.990
W4XDE9_STRPU	W4Y086_STRPU	W4XDE9	W4Y086	Uncharacterized protein.	Uncharacterized protein.	0.987
W4XDE9_STRPU	W4Y6T1_STRPU	W4XDE9	W4Y6T1	Uncharacterized protein.	SQHop_cyclase_C domain-containing protein.	0.989
W4XDE9_STRPU	W4Y8T7_STRPU	W4XDE9	W4Y8T7	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.987
W4XDE9_STRPU	W4YT35_STRPU	W4XDE9	W4YT35	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.851
W4XDE9_STRPU	W4ZGU8_STRPU	W4XDE9	W4ZGU8	Uncharacterized protein.	Uncharacterized protein.	0.980
W4XDE9_STRPU	W4ZGU9_STRPU	W4XDE9	W4ZGU9	Uncharacterized protein.	Uncharacterized protein.	0.980
W4XUK9_STRPU	Cyp51	W4XUK9	W4ZBR3	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.971
W4XUK9_STRPU	W4XDE9_STRPU	W4XUK9	W4XDE9	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein.	0.780