STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z3K2_STRPUUncharacterized protein. (742 aa)    
Predicted Functional Partners:
W4Z652_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.896
W4ZDM4_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.896
W4Y269_STRPU
ARID domain-containing protein.
    
 0.691
W4YZA2_STRPU
Tudor domain-containing protein.
    
 0.691
W4XJX9_STRPU
Uncharacterized protein.
   
 0.671
W4XVD2_STRPU
Uncharacterized protein.
   
 0.671
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity).
   
 0.634
W4XKF2_STRPU
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.634
W4YEG2_STRPU
Uncharacterized protein.
   
 0.634
W4YWE0_STRPU
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.634
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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