STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZD45_STRPUUncharacterized protein. (389 aa)    
Predicted Functional Partners:
W4YBN8_STRPU
Uncharacterized protein.
   
 0.999
W4Z680_STRPU
Uncharacterized protein.
   
 0.994
W4Y7I1_STRPU
C2H2-type domain-containing protein.
    
 0.993
W4Z5G1_STRPU
Uncharacterized protein.
    
 0.989
W4ZF77_STRPU
SET domain-containing protein.
    
 0.989
W4Z652_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.987
W4ZDM4_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.987
W4Z4H1_STRPU
PHD-type domain-containing protein.
   
 0.941
W4ZHS7_STRPU
Uncharacterized protein.
   
 0.941
W4ZGY7_STRPU
PRC2_HTH_1 domain-containing protein.
    
 0.917
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.