STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZJJ1_STRPUCMP/dCMP-type deaminase domain-containing protein. (343 aa)    
Predicted Functional Partners:
W4XTK1_STRPU
CMP/dCMP-type deaminase domain-containing protein.
   
 0.965
W4YIH0_STRPU
Uncharacterized protein.
   
 0.965
W4ZBG0_STRPU
Uncharacterized protein.
   
 0.965
W4Z3A6_STRPU
Uncharacterized protein.
   
 0.828
W4XZK8_STRPU
Uncharacterized protein; Belongs to the thymidine kinase family.
    
 0.809
W4XI20_STRPU
Uncharacterized protein.
   
 0.777
W4XFL9_STRPU
A to I editase domain-containing protein.
      
 0.769
W4XZ14_STRPU
PNP_UDP_1 domain-containing protein.
     
 0.727
W4Y137_STRPU
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.720
W4Y9Q7_STRPU
Uncharacterized protein.
      
 0.717
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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