STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELO_1194ABC-type transport system periplasmic substrate-binding protein. (318 aa)    
Predicted Functional Partners:
HELO_1193
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.994
HELO_1192
ABC-type transport system ATP-binding protein; Contains 2 ATP-binding domains.
 
 0.990
HELO_3968
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.972
HELO_3969
ABC-type transport system ATP-binding protein; Contains 2 ATP-binding domains.
 
 0.968
HELO_1191
Multidrug resistance protein 1 - Mus musculus (Mouse), Hypothetical protein.
 
    0.921
HELO_3970
ABC-type transport system periplasmic substrate-binding protein.
  
  
 
0.912
rbsC
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.893
araH
ABC-type transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.876
gacS
Signal transduction histidine-protein kinase barA -Shigella flexneri,InterPro: Histidine kinase, High confidence in function and specificity.
   
 
 0.875
HELO_3700
Hybrid signal transduction histidine kinase K -Dictyostelium discoideum (Slime mold),InterPro: Histidine kinase, Specificity unclear.
   
 
 0.875
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.