STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadenoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)    
Predicted Functional Partners:
HELO_3945
Acyl-CoA dehydrogenase family member 9 mitochondrial precursor - Homo sapiens (Human),InterPro: Acyl-CoA dehydrogenase C-terminal, High confidence in function and specificity.
 
 0.968
HELO_3139
Very long-chain specific acyl-CoA dehydrogenase mitochondrial precursor - Mus musculus (Mouse),InterPro: Acyl-CoA dehydrogenase C-terminal, Specificity unclear.
 
 0.954
HELO_3286
3-hydroxyacyl-CoA dehydrogenase NAD-binding; Lambda-crystallin homolog - Pongo pygmaeus (Bornean orangutan),InterPro: 3-hydroxyacyl-CoA dehydrogenase NAD binding domain, High confidence in function and specificity.
 0.886
ivd
Hypothetical protein; Isovaleryl-CoA dehydrogenase 1 mitochondrial precursor - Solanum tuberosum (Potato),InterPro: Acyl-CoA dehydrogenase C-terminal, High confidence in function and specificity.
 
 0.822
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.819
caiA
butyryl-CoA dehydrogenase; High confidence in function and specificity.
 
 0.817
HELO_3559
Probable two-component sensor; Phytochrome 1 - Selaginella martensii (Martenss spike moss),InterPro: Na+/solute symporter, Specificity unclear.
  
 
 0.815
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.812
gcdH
Glutaryl-CoA dehydrogenase mitochondrial precursor -Sus scrofa (Pig),InterPro: Acyl-CoA dehydrogenase C-terminal, High confidence in function and specificity.
 
 0.803
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
   
 
 0.801
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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