Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
tfc11 | tfc12 | HELO_4055 | HELO_4056 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein. | 0.972 |
tfc11 | tfc13 | HELO_4055 | HELO_4057 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein; DNA-directed RNA polymerase subunit beta -Acidothermus cellulolyticus (strain ATCC 43068 / 11B),Hypothetical protein. | 0.972 |
tfc11 | tfc14 | HELO_4055 | HELO_4058 | Hypothetical protein predicted by Glimmer/Critica. | Putative secreted protein; Pleckstrin homology-like domain family B member 1 -Rattus norvegicus (Rat), High confidence in function and specificity. | 0.972 |
tfc11 | tfc15 | HELO_4055 | HELO_4059 | Hypothetical protein predicted by Glimmer/Critica. | Alginate biosynthesis protein algK precursor -Pseudomonas syringae pv. tomato, Hypothetical protein. | 0.972 |
tfc11 | tfc16 | HELO_4055 | HELO_4060 | Hypothetical protein predicted by Glimmer/Critica. | Probable conjugal transfer protein trbE part 2 -Rhizobium sp. (strain NGR234), Hypothetical protein. | 0.891 |
tfc11 | tfc3 | HELO_4055 | HELO_4045 | Hypothetical protein predicted by Glimmer/Critica. | Regulator of G-protein signaling 9-binding protein -Danio rerio (Zebrafish) (Brachydanio rerio), Hypothetical protein. | 0.848 |
tfc11 | tfc4 | HELO_4055 | HELO_4046 | Hypothetical protein predicted by Glimmer/Critica. | Lytic transglycosylase, catalytic; Forkhead box protein L1 - Mus musculus (Mouse),Hypothetical protein. | 0.845 |
tfc11 | tfc5 | HELO_4055 | HELO_4047 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein; S-adenosylmethionine:tRNA ribosyltransferase-isomerase - Vibrio parahaemolyticus,Specificity unclear. | 0.849 |
tfc11 | tfc6 | HELO_4055 | HELO_4050 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein; Dihydroxy-acid dehydratase - Mycobacterium sp. (strain JLS), Hypothetical protein. | 0.863 |
tfc11 | tfc7 | HELO_4055 | HELO_4051 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein; C-C chemokine receptor-like 2 - Mus musculus (Mouse), Hypothetical protein. | 0.864 |
tfc12 | tfc11 | HELO_4056 | HELO_4055 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.972 |
tfc12 | tfc13 | HELO_4056 | HELO_4057 | Hypothetical protein. | Hypothetical protein; DNA-directed RNA polymerase subunit beta -Acidothermus cellulolyticus (strain ATCC 43068 / 11B),Hypothetical protein. | 0.972 |
tfc12 | tfc14 | HELO_4056 | HELO_4058 | Hypothetical protein. | Putative secreted protein; Pleckstrin homology-like domain family B member 1 -Rattus norvegicus (Rat), High confidence in function and specificity. | 0.972 |
tfc12 | tfc15 | HELO_4056 | HELO_4059 | Hypothetical protein. | Alginate biosynthesis protein algK precursor -Pseudomonas syringae pv. tomato, Hypothetical protein. | 0.972 |
tfc12 | tfc16 | HELO_4056 | HELO_4060 | Hypothetical protein. | Probable conjugal transfer protein trbE part 2 -Rhizobium sp. (strain NGR234), Hypothetical protein. | 0.891 |
tfc12 | tfc3 | HELO_4056 | HELO_4045 | Hypothetical protein. | Regulator of G-protein signaling 9-binding protein -Danio rerio (Zebrafish) (Brachydanio rerio), Hypothetical protein. | 0.849 |
tfc12 | tfc4 | HELO_4056 | HELO_4046 | Hypothetical protein. | Lytic transglycosylase, catalytic; Forkhead box protein L1 - Mus musculus (Mouse),Hypothetical protein. | 0.845 |
tfc12 | tfc5 | HELO_4056 | HELO_4047 | Hypothetical protein. | Hypothetical protein; S-adenosylmethionine:tRNA ribosyltransferase-isomerase - Vibrio parahaemolyticus,Specificity unclear. | 0.849 |
tfc12 | tfc6 | HELO_4056 | HELO_4050 | Hypothetical protein. | Hypothetical protein; Dihydroxy-acid dehydratase - Mycobacterium sp. (strain JLS), Hypothetical protein. | 0.863 |
tfc12 | tfc7 | HELO_4056 | HELO_4051 | Hypothetical protein. | Hypothetical protein; C-C chemokine receptor-like 2 - Mus musculus (Mouse), Hypothetical protein. | 0.864 |
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