STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfc22Hypothetical protein; Protocadherin gamma-A11 precursor - Homo sapiens (Human), Hypothetical protein. (472 aa)    
Predicted Functional Partners:
tfc23
Hypothetical protein; Alanyl-tRNA synthetase - Streptomyces coelicolor,Hypothetical protein.
 
     0.972
tfc19
Hypothetical protein; RNA-binding post-transcriptional regulator cip2 -Schizosaccharomyces pombe (Fission yeast), Hypothetical protein.
 
     0.965
tfc24
Hypothetical protein; Glycyl-glycine endopeptidase ALE-1 precursor -Staphylococcus capitis, Hypothetical protein.
 
     0.885
tfc18
Hypothetical protein predicted by Glimmer/Critica.
       0.883
pilL
K02487 type IV pili sensor histidine kinase/response regulator; Ephrin-A1 precursor - Homo sapiens (Human),Hypothetical protein.
 
     0.800
tfc3
Regulator of G-protein signaling 9-binding protein -Danio rerio (Zebrafish) (Brachydanio rerio), Hypothetical protein.
 
     0.800
tfc5
Hypothetical protein; S-adenosylmethionine:tRNA ribosyltransferase-isomerase - Vibrio parahaemolyticus,Specificity unclear.
 
     0.800
tfc7
Hypothetical protein; C-C chemokine receptor-like 2 - Mus musculus (Mouse), Hypothetical protein.
 
     0.800
tfc11
Hypothetical protein predicted by Glimmer/Critica.
 
     0.800
tfc12
Hypothetical protein.
 
     0.800
Your Current Organism:
Halomonas elongata
NCBI taxonomy Id: 768066
Other names: H. elongata DSM 2581, Halomonas elongata ATCC 33173, Halomonas elongata DSM 2581, Halomonas elongata str. DSM 2581, Halomonas elongata strain DSM 2581
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