STRINGSTRING
TTX_0009 protein (Thermoproteus tenax) - STRING interaction network
"TTX_0009" - Hypothetical protein in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_0009Hypothetical protein (119 aa)    
Predicted Functional Partners:
TTX_0008
Hypothetical protein (120 aa)
              0.862
potE
Amino acid transporter (438 aa)
              0.604
TTX_0006
RNA-binding protein of the translin family (212 aa)
              0.592
gar1
RNA binding protein (84 aa)
              0.577
srp19
Signal recognition particle subunit SRP19; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (95 aa)
              0.571
gatA
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit (412 aa)
              0.525
topA
Topoisomerase (DNA) III alpha (606 aa)
              0.448
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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