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rps6e protein (Thermoproteus tenax) - STRING interaction network
"rps6e" - 30S ribosomal protein S6e in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps6e30S ribosomal protein S6e (149 aa)    
Predicted Functional Partners:
rpl13e
Ribosomal protein L13e fused to a ribosomal protein L15-like domain (161 aa)
     
  0.999
rps28e
30S ribosomal protein S28e (77 aa)
   
  0.999
rps8e
30S ribosomal protein S8e (132 aa)
   
  0.999
rps4e
30S ribosomal protein S4e (235 aa)
   
  0.999
rps19e
Ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (158 aa)
   
  0.999
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (225 aa)
   
  0.999
rps5
Ribosomal protein S5p/L7e; With S4 and S12 plays an important role in translational accuracy (203 aa)
   
  0.999
rps3ae
30S ribosomal protein S3ae (221 aa)
   
  0.999
rps2
30S ribosomal protein S2p (210 aa)
   
  0.999
rps17e
30S ribosomal protein S17e (75 aa)
     
  0.999
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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