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rpS30e protein (Thermoproteus tenax) - STRING interaction network
"rpS30e" - 30S ribosomal S30e protein in Thermoproteus tenax
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpS30e30S ribosomal S30e protein (54 aa)    
Predicted Functional Partners:
TTX_0162
tRNA(1-methyladenosine) methyltransferase (255 aa)
              0.859
TTX_0151
30S ribosomal protein S30e (54 aa)
 
   
 
0.826
rps26e
30S ribosomal protein S26e (96 aa)
 
     
  0.822
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) (487 aa)
              0.787
TTX_0166
Hypothetical protein (134 aa)
 
          0.765
elf1
Transcription elongation factor Elf1, Zn ribbon-containing protein (97 aa)
   
     
  0.738
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (186 aa)
              0.675
TTX_0164a
RNA base methyltransferase family enzyme (163 aa)
              0.675
TTX_1975
Queuine/archaeosine tRNA-ribosyltransferase (317 aa)
   
          0.628
rps27ae
30S ribosomal protein S27ae (60 aa)
   
          0.623
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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