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cdc48-1 protein (Thermoproteus tenax) - STRING interaction network
"cdc48-1" - AAA family ATPase in Thermoproteus tenax
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
cdc48-1AAA family ATPase (730 aa)    
Predicted Functional Partners:
pcnaB
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (258 aa)
   
  0.902
pcnaA
DNA polymerase sliding clamp A; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (252 aa)
   
  0.902
psmA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (239 aa)
 
 
  0.896
psmB1
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (199 aa)
   
 
  0.880
psmB2
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (204 aa)
   
 
  0.880
fen
Flap-structure endonuclease; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pa [...] (346 aa)
   
 
  0.877
TTX_0454
Hypothetical protein (78 aa)
              0.866
TTX_1065
Histone deacetylase family protein (268 aa)
   
  0.801
TTX_1005a
Histone deacetylase family protein (336 aa)
   
  0.801
ef1b
Elongation factor aEF-1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA (92 aa)
   
 
  0.795
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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