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aef-1b protein (Thermoproteus tenax) - STRING interaction network
"aef-1b" - Elongation factor 1-beta in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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aef-1bElongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA (92 aa)    
Predicted Functional Partners:
rpl21e
annotation not available (98 aa)
 
 
  0.977
rpl13e
annotation not available (161 aa)
   
      0.976
rpl18e
annotation not available (122 aa)
   
 
  0.971
rpl15e
annotation not available (184 aa)
     
 
  0.966
rps3p
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (216 aa)
   
   
  0.966
rpl6p
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (195 aa)
   
   
  0.957
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (105 aa)
   
   
  0.956
rps6e
annotation not available (149 aa)
   
   
  0.956
rpl18p
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (203 aa)
   
   
  0.956
rps17p
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (147 aa)
 
   
  0.956
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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