STRINGSTRING
TTX_0710 protein (Thermoproteus tenax) - STRING interaction network
"TTX_0710" - Putative ABC-class ATPase in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_0710Putative ABC-class ATPase (589 aa)    
Predicted Functional Partners:
aRF-1
Peptide chain release factor aRF subunit 1 (389 aa)
   
 
  0.965
eif2b
Translation initiation factor aIF-2 subunit beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA (136 aa)
   
 
  0.944
infB
infB translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (590 aa)
   
      0.932
flpA
Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (235 aa)
     
      0.932
rpl10
50S ribosomal protein L10e; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (346 aa)
   
      0.904
pelA
Cell division protein pelota; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity (340 aa)
   
 
  0.866
TTX_0711
DNA-directed RNA polymerase subunit M/transcription elongation factor TFIIS (89 aa)
   
   
  0.850
TTX_1652
GTP1/OBG family GTP-binding protein (349 aa)
   
   
  0.825
eif2G
Translation initiation factor eIF-2 gamma subunit (411 aa)
   
        0.825
rps6e
30S ribosomal protein S6e (149 aa)
     
      0.800
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
Server load: low (10%) [HD]