STRINGSTRING
psmA protein (Thermoproteus tenax) - STRING interaction network
"psmA" - Proteasome subunit alpha in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmAProteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (239 aa)    
Predicted Functional Partners:
psmB1
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (199 aa)
 
 
0.992
psmB2
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (204 aa)
 
 
0.992
TTX_0675
Putative metal-dependent protease (125 aa)
     
  0.979
cdc48
AAA family cell division cycle protein (782 aa)
 
 
  0.900
cdc48-1
AAA family ATPase (730 aa)
 
 
  0.896
rpl15e
50S ribosomal protein L15e (184 aa)
 
   
  0.868
TTX_0818
Exosome subunit (232 aa)
 
        0.854
TTX_0815
Exosome subunit (148 aa)
              0.846
TTX_0684
Serine/threonine protein phosphatase (311 aa)
 
  0.845
miaB
2-methylthioadenine synthetase (411 aa)
       
      0.835
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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