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rrp4 protein (Thermoproteus tenax) - STRING interaction network
"rrp4" - Exosome complex RNA-binding protein in Thermoproteus tenax
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rrp4Exosome complex RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome (236 aa)    
Predicted Functional Partners:
rph
Exosome complex exonuclease 1; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3’->5’ exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails (245 aa)
 
  0.999
rrp42
Exosome complex exonuclease 2; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site (274 aa)
 
  0.999
dnaG
Putative DNA primase DnaG (406 aa)
       
  0.999
csl4
RNA-binding protein, S1 and Zn-ribbon domains; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs (178 aa)
   
  0.997
TTX_0823
Putative exosome subunit/U3 small nucleolar ribonucleoprotein; Probably involved in the biogenesis of the ribosome (187 aa)
   
 
    0.954
rpl13e
Ribosomal protein L13e fused to a ribosomal protein L15-like domain (161 aa)
   
 
    0.952
rpl37ae
50S ribosomal protein L37ae (105 aa)
   
 
    0.926
tuf
Translation elongation factor aEF-1 subunit alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (444 aa)
     
  0.921
TTX_0818
Exosome subunit (232 aa)
 
        0.919
nep1
Hypothetical protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA (245 aa)
   
    0.913
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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