STRINGSTRING
rtcB protein (Thermoproteus tenax) - STRING interaction network
"rtcB" - RtcB family protein in Thermoproteus tenax
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rtcBRtcB family protein (483 aa)    
Predicted Functional Partners:
TTX_1522
SHS2 domain-containing protein implicated in nucleic acid metabolism; Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently (146 aa)
 
  0.944
TTX_1032
Peroxiredoxins (129 aa)
              0.869
dys
Deoxyhypusine synthase (294 aa)
 
   
  0.841
purB
Adenylosuccinate lyase (403 aa)
   
   
  0.835
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (291 aa)
   
   
  0.825
rcl1
RNA-3’-phosphate cyclase; Catalyzes the conversion of 3’-phosphate to a 2’,3’- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps- (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3’P to produce RNA- N3’PP5’A; (C) and attack of the adjacent 2’-hydroxyl on the 3’- phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing (361 aa)
 
   
  0.815
cdc6
Cell division control protein 6; Involved in regulation of DNA replication (385 aa)
         
  0.802
mtaP
5’-methylthioadenosine phosphorylase (282 aa)
         
  0.737
corA
Magnesium and cobalt transport protein (213 aa)
 
          0.693
cyaB
Adenylate cyclase (173 aa)
           
  0.680
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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