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cdc48 protein (Thermoproteus tenax) - STRING interaction network
"cdc48" - AAA family cell division cycle protein in Thermoproteus tenax
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc48AAA family cell division cycle protein (782 aa)    
Predicted Functional Partners:
hsp20
Small heat shock protein (174 aa)
 
   
  0.943
pcnaB
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (258 aa)
   
  0.902
pcnaA
DNA polymerase sliding clamp A; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (252 aa)
   
  0.902
psmA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (239 aa)
 
 
  0.900
psmB1
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (199 aa)
   
 
  0.880
psmB2
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (204 aa)
   
 
  0.880
rfcS
Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA (328 aa)
     
  0.873
rfc
Replication factor C small subunit (321 aa)
     
  0.832
TTX_1065
Histone deacetylase family protein (268 aa)
   
  0.801
TTX_1005a
Histone deacetylase family protein (336 aa)
   
  0.801
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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