STRINGSTRING
gad protein (Thermoproteus tenax) - STRING interaction network
"gad" - Gluconate dehydratase in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadGluconate dehydratase (391 aa)    
Predicted Functional Partners:
kdgK
2-keto-3-deoxygluconate kinase (310 aa)
 
 
  0.997
kdgA
2-keto-3-deoxy-(6-phospho-) gluconate aldolase (286 aa)
   
 
  0.997
dapA
Dihydrodipicolinate synthase (302 aa)
   
 
  0.913
alkK
Medium-chain acyl-CoA ligase (553 aa)
   
 
  0.890
fadD
long-chain-fatty-acid---CoA ligase (583 aa)
   
 
  0.890
mhpC
Alpha/beta superfamily hydrolase (202 aa)
   
 
  0.888
pyk
Pyruvate kinase (446 aa)
       
  0.863
rbsK
Putative ribokinase (308 aa)
     
  0.859
ppdK
Pyruvate, phosphate dikinase (915 aa)
       
  0.793
gaa
Glucan-1,4-alpha-glucosidase (606 aa)
         
  0.778
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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