STRINGSTRING
rad50 protein (Thermoproteus tenax) - STRING interaction network
"rad50" - Purine NTPase in Thermoproteus tenax
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad50Purine NTPase (704 aa)    
Predicted Functional Partners:
mre11
Exonuclease (378 aa)
 
  0.999
radA
DNA repair protein; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (382 aa)
   
  0.984
TTX_1160
RadA-like protein (310 aa)
   
  0.974
top6A
Type II DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (366 aa)
     
  0.955
fen
Flap-structure endonuclease; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pa [...] (346 aa)
   
  0.954
TTX_1917
DNA polymerase II (785 aa)
     
  0.946
polB2
Possible DNA-directed DNA polymerase (550 aa)
     
  0.946
TTX_0168
polB DNA-directed DNA polymerase I (B1) (860 aa)
     
  0.946
hel308
DNA helicase; DNA-dependent ATPase and 3’-5’ DNA helicase that may be involved in repair of stalled replication forks (711 aa)
   
 
  0.935
herA
HerA helicase (553 aa)
 
     
  0.918
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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