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TTX_1228 protein (Thermoproteus tenax) - STRING interaction network
"TTX_1228" - CRISPR system associated protein in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1228CRISPR system associated protein (473 aa)    
Predicted Functional Partners:
TTX_1233
CRISPR system associated protein, RAMP superfamily (307 aa)
         
  0.693
TTX_1230
CRISPR system associated protein (749 aa)
              0.597
TTX_1240
CRISPR system associated protein (225 aa)
         
  0.571
TTX_1272
RAMP superfamily protein (269 aa)
         
  0.530
TTX_0232
RAMP superfamily protein (249 aa)
         
  0.529
TTX_1243
CRISPR system associated protein (428 aa)
           
  0.523
cca
tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3’- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate (429 aa)
           
  0.522
hisS
histidyl-tRNA synthetase (420 aa)
           
  0.522
TTX_0660
Hypothetical protein (829 aa)
           
  0.522
TTX_1457
Histone macroH2A1 family phosphatase (179 aa)
           
  0.521
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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