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TTX_1240 protein (Thermoproteus tenax) - STRING interaction network
"TTX_1240" - CRISPR system associated protein in Thermoproteus tenax
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1240CRISPR system associated protein (225 aa)    
Predicted Functional Partners:
TTX_0235
CRISPR system associated protein (311 aa)
   
     
  0.757
TTX_1241
Hypothetical protein (65 aa)
              0.733
TTX_1242
Hypothetical protein (56 aa)
              0.728
csa1
CRISPR-associated RecB family nuclease; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (By similarity). A ssDNA exonuclease with 5’ to 3’ and perhaps 3’ to 5’ activity (278 aa)
   
     
  0.721
cas4
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). This may be a 5’ to 3’ ssDNA exonuclease (By similarity) (190 aa)
   
     
  0.699
cas7
CRISPR system associated protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA) (By similarity) (329 aa)
   
     
  0.683
TTX_1266
HerA helicase (533 aa)
 
          0.666
TTX_1233
CRISPR system associated protein, RAMP superfamily (307 aa)
   
     
  0.656
TTX_1077
NAD(FAD)-dependent dehydrogenase (316 aa)
   
          0.601
TTX_1243
CRISPR system associated protein (428 aa)
         
  0.571
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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