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rfbD protein (Thermoproteus tenax) - STRING interaction network
"rfbD" - dTDP-4-dehydrorhamnose reductase in Thermoproteus tenax
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbDdTDP-4-dehydrorhamnose reductase (274 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (187 aa)
 
  0.999
rfbB
dTDP-glucose-4,6-dehydratase (320 aa)
 
 
  0.997
rfbA
dTDP-glucose pyrophosphorylase (320 aa)
 
 
  0.974
TTX_0901
Nucleoside-diphosphate- sugarepimerase/dehydratase (305 aa)
 
  0.929
galE-2
UDP-glucose 4-epimerase (314 aa)
   
  0.920
TTX_0697
Glycosyl transferase (361 aa)
   
   
  0.875
snt-2
Sugar phosphate nucleotidyl transferase (224 aa)
   
   
  0.784
snt-4
Sugar phosphate nucleotidyl transferase (340 aa)
   
   
  0.784
snt-1
Sugar-phosphate nucleotidyl transferase (227 aa)
   
   
  0.784
snt-6
Sugar phosphate nucleotidyltransferase (360 aa)
   
   
  0.784
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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