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STRINGSTRING
rfbD protein (Thermoproteus tenax) - STRING interaction network
"rfbD" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbDannotation not available (274 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (187 aa)
  0.999
rfbB
annotation not available (320 aa)
  0.998
rfbA
annotation not available (320 aa)
 
 
  0.989
TTX_0650
annotation not available (282 aa)
              0.554
TTX_1369
annotation not available (167 aa)
         
  0.551
TTX_1345
annotation not available (325 aa)
 
   
  0.543
TTX_1349
annotation not available (352 aa)
 
   
  0.534
TTX_1722
annotation not available (404 aa)
       
  0.529
TTX_1354
annotation not available (342 aa)
 
   
  0.515
pgm/manB
Phosphoglucomutase / phosphomannomutase; Unknown EC_number=5.4.2.2 / 5.4.2.8; Belongs to the phosphohexose mutase family (436 aa)
   
   
  0.455
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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