STRINGSTRING
lhr protein (Thermoproteus tenax) - STRING interaction network
"lhr" - Large helicase-like protein in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lhrLarge helicase-like protein (940 aa)    
Predicted Functional Partners:
TTX_1395
Metallo-beta-lactamase family protein (317 aa)
 
     
  0.841
lig
DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (592 aa)
 
          0.786
TTX_1584
ICC-like phosphoesterase (267 aa)
 
     
  0.748
TTX_1432
Hypothetical protein (184 aa)
              0.668
epf1
mRNA 3-end processing factor (424 aa)
         
  0.608
mre11
Exonuclease (378 aa)
     
 
  0.413
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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