• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
TTX_1471 protein (Thermoproteus tenax) - STRING interaction network
"TTX_1471" - annotation not available in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTX_1471annotation not available (171 aa)    
Predicted Functional Partners:
rps12p
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (147 aa)
 
 
  0.948
rps13p
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (154 aa)
   
      0.943
rps10p
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (106 aa)
     
      0.839
rps4e
annotation not available (235 aa)
   
      0.819
rps17p
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (147 aa)
   
      0.819
TTX_1996
annotation not available (120 aa)
   
 
  0.810
rps15p
annotation not available (151 aa)
   
      0.804
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (158 aa)
   
      0.799
rps3ae
annotation not available (221 aa)
   
 
  0.787
rps27e
annotation not available (67 aa)
   
 
  0.775
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
Server load: low (12%) [HD]