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rpl13e protein (Thermoproteus tenax) - STRING interaction network
"rpl13e" - Ribosomal protein L13e fused to a ribosomal protein L15-like domain in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl13eRibosomal protein L13e fused to a ribosomal protein L15-like domain (161 aa)    
Predicted Functional Partners:
rpl34e
50S ribosomal protein L34e (85 aa)
   
  0.999
rpl14e
Putative 50S ribosomal protein L14e (101 aa)
   
  0.999
rpl21e
50S ribosomal protein L21e (98 aa)
   
  0.999
rpl44e
Ribosomal protein L44e; Binds to the 23S rRNA (91 aa)
   
  0.999
rpl37ae
50S ribosomal protein L37ae (105 aa)
   
  0.999
rpl24p
50S ribosomal protein L24p; Located at the polypeptide exit tunnel on the outside of the subunit (126 aa)
   
  0.999
rpl29p
Putative secreted protein (69 aa)
   
  0.999
rpl30e
50S ribosomal protein L30e (104 aa)
     
  0.999
rpl10p
50S ribosomal protein L10p (179 aa)
     
  0.999
rpl7ae
50S ribosomal protein L7ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (150 aa)
   
  0.999
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
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