STRINGSTRING
icd protein (Thermoproteus tenax) - STRING interaction network
"icd" - Isocitrate dehydrogenase in Thermoproteus tenax
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icdIsocitrate dehydrogenase (439 aa)    
Predicted Functional Partners:
acn
Aconitate hydratase (879 aa)
   
  0.997
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (308 aa)
   
 
  0.982
TTX_1127
Glutamate dehydrogenase (425 aa)
     
  0.979
TTX_1095
Glutamate dehydrogenase (414 aa)
     
  0.979
TTX_1758
2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha (635 aa)
       
  0.970
TTX_1455
2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha (565 aa)
       
  0.970
3
Glutamate synthase domain 1+3 (547 aa)
   
 
  0.963
TTX_1590
Putative aconitase (369 aa)
         
    0.962
TTX_1589
Putative aconitase (118 aa)
         
    0.962
cis2
Citrate synthase 2 (410 aa)
   
   
  0.948
Your Current Organism:
Thermoproteus tenax
NCBI taxonomy Id: 768679
Other names: T. tenax, T. tenax Kra 1, Thermoproteus tenax, Thermoproteus tenax DSM 2078, Thermoproteus tenax JCM 9277, Thermoproteus tenax Kra 1, Thermoproteus tenax str. Kra 1, Thermoproteus tenax strain Kra 1
Server load: low (7%) [HD]